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IEBH-353: Sync with the latest changes#12

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vmoshynskyi merged 4 commits intomainfrom
IEBH-353
Nov 26, 2025
Merged

IEBH-353: Sync with the latest changes#12
vmoshynskyi merged 4 commits intomainfrom
IEBH-353

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@vmoshynskyi vmoshynskyi commented Nov 26, 2025

Add the latest changes from the pilot repo.

@vmoshynskyi vmoshynskyi requested a review from Copilot November 26, 2025 12:16
@vmoshynskyi vmoshynskyi self-assigned this Nov 26, 2025
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Pull request overview

This PR synchronizes the repository with the latest changes from the pilot repo, primarily updating development tooling and CI/CD infrastructure while documenting security improvements to the file handling workflow.

Key Changes:

  • Upgraded pre-commit from ^2.19.0 to ^3.5.0 and enabled docformatter hook (v1.7.7) in pre-commit configuration
  • Added comprehensive GitHub Actions CI/CD pipeline with automated testing, coverage reporting, and binary releases
  • Updated version to 2.2.7 with security-focused workflow changes (restricted core zone uploads and greenroom zone downloads)

Reviewed changes

Copilot reviewed 5 out of 6 changed files in this pull request and generated 5 comments.

Show a summary per file
File Description
pyproject.toml Upgrades pre-commit dependency from ^2.19.0 to ^3.5.0
app/resources/custom_help.py Updates version to 2.2.7 and documents security changes to file handling workflow
README.md Removes trailing whitespace at end of file
.pre-commit-config.yaml Enables docformatter hook (v1.7.7) for automatic docstring formatting
.github/workflows/hdc-pipeline.yml Adds new CI/CD pipeline with testing, coverage reporting, and binary build/release automation

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github-actions bot commented Nov 26, 2025

Coverage

Coverage Report
FileStmtsMissCoverMissing
__init__.py00100% 
pilotcli.py0310%7, 9–10, 12–16, 19–23, 25–30, 33–41, 44–46
commands
   __init__.py00100% 
   container_registry.py0470%7, 9–12, 15–16, 18, 21–26, 29–35, 38–46, 49–55, 58–67
   dataset.py0900%7–8, 10–15, 18–19, 21, 24–25, 33–35, 44–49, 51–59, 61–71, 74–78, 87–91, 93–102, 104–114, 117–120, 128–138, 140–141
   entry_point.py0710%7, 9–10, 12–29, 32–34, 37–39, 42–46, 49–53, 56–60, 63–66, 69–71, 74–77, 80–97
   file.py07562%38, 136, 139, 142, 161–162, 164–167, 193, 195, 268–275, 277, 279, 292–298, 300, 327–334, 336, 370–376, 378–383, 385–397, 399–402, 404–406, 408–410
   project.py0400%7–8, 10–13, 16–17, 19, 22–25, 33, 41, 50–54, 56–64, 66–76
   use_config.py0130%7, 9–11, 14–15, 17, 20–22, 29–31
   user.py0300%7, 9–15, 18–19, 21, 24–30, 32, 34, 37–38, 40, 43–44, 53–57
configs
   __init__.py00100% 
   app_config.py00100% 
   user_config.py01380%51, 60, 64, 68, 72, 76, 80, 84, 88, 92, 96, 100, 104
models
   __init__.py00100% 
   convert_type.py080%7, 9, 12–17
   service_meta_class.py0180%11
   singleton.py00100% 
   upload_form.py02860%12, 27, 31, 35, 39, 43, 47, 51, 55, 59, 63, 67, 71, 75, 79, 83, 87, 91, 95, 99, 127, 140–146
resources
   __init__.py00100% 
   custom_error.py00100% 
   custom_help.py00100% 
services
   __init__.py00100% 
services/container_registry_manager
   __init__.py00100% 
   container_registry_manager.py01310%7, 9, 11–16, 19–22, 24–28, 30–35, 37–46, 48–62, 64–66, 68–84, 86–88, 90–101, 103–105, 107–112, 127–138, 142–145, 147–164, 166, 168–171
services/crypto
   __init__.py00100% 
   crypto.py01940%36, 43–48, 58–60, 67–73, 75, 77
services/dataset_manager
   __init__.py00100% 
   dataset_detail.py02370%44, 46, 63, 70–75, 77–79, 81–90, 92
   dataset_download.py01290%7–10, 12–13, 15–22, 24, 27–37, 39–42, 47–53, 55–57, 59–62, 67–73, 75–77, 79–80, 83–88, 90–91, 93–100, 102, 104–110, 112–116, 118–119, 121–124, 132–135, 137–144, 146–147, 149–151, 153–162, 164, 166–174, 176
   dataset_list.py0684%41, 47–48, 50–52
   model.py080%7, 10–14, 16–17
services/file_manager
   __init__.py00100% 
   file_lineage.py0741%15–16, 25, 28–30, 32
   file_list.py04926%27–31, 33–36, 39, 47–62, 65–67, 70–77, 79–90
   file_manifests.py09525%21–26, 41–45, 49–50, 53–61, 63, 67–70, 73–77, 79, 83–84, 87–89, 93–94, 97–104, 106, 109–117, 122–128, 133–138, 141–147, 149–151, 154–160, 162–164, 166–169
   file_tag.py03931%25, 29–33, 35, 38–50, 52–54, 56–57, 61–63, 66–70, 72–75, 77–78
services/file_manager/file_download
   __init__.py00100% 
   download_client.py018917%31–43, 46–55, 58–59, 61–62, 65, 67–68, 72–75, 82, 87–90, 92–100, 102, 104, 108–113, 115, 118–119, 122–128, 130–131, 133–135, 138–147, 150–155, 159–168, 176–178, 180–187, 189–193, 198–208, 210–211, 214–215, 220–221, 225–230, 234–235, 238–240, 242–253, 257–260, 263–267, 269–271, 273–275, 277–278, 280, 284–286, 288–301, 303
   model.py0187%17
services/file_manager/file_upload
   __init__.py00100% 
   exception.py0175%12
   file_upload.py05959%32–39, 73, 96, 124–125, 129, 131, 133–135, 137, 139, 151–157, 159–164, 166, 168–173, 177, 179–180, 182–183, 185–193, 195–196, 198, 250–251, 255
   models.py0591%23, 41, 140–142
   upload_client.py08754%99–102, 164–166, 179, 181–186, 188–192, 195, 197–209, 211, 254, 257, 261–266, 270–275, 277, 281, 283, 285, 287, 305, 330–331, 336, 340–343, 347, 363–365, 367–369, 378, 383–384, 386, 388–389, 391–394, 396, 410–416, 426
   upload_validator.py02650%29–31, 34–36, 40–44, 47–56, 59–60, 65, 67, 69
services/logger_services
   __init__.py00100% 
   log_functions.py00100% 
services/output_manager
   __init__.py00100% 
   error_handler.py0891%88–90, 102–104, 109, 118
   help_page.py01085%29–30, 38–39, 48–49, 61–62, 102–103
   message_handler.py06558%19–24, 29, 34, 39, 49, 54–56, 61, 66, 71, 76, 89, 94, 101, 106, 111, 115, 131, 146, 156, 166, 185, 189, 193, 207–218, 229–234, 236–242, 253, 257–258, 262–263, 265–266, 270, 274, 278
services/project_manager
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   project.py0683%40, 46–47, 49–51
services/user_authentication
   __init__.py00100% 
   decorator.py01367%31, 34, 51–55, 57, 61–64, 66
   token_manager.py02157%27, 30–32, 35, 38–39, 42–43, 63, 67, 71–72, 78–79, 81–84, 86–87
   user_login_logout.py04364%40–43, 113, 117–123, 125–127, 131–132, 136–143, 145–147, 151–152, 159–164, 166–168, 172–175
   user_set_config.py0947%17–20, 24–26, 28–29
utils
   __init__.py00100% 
   aggregated.py04749%24, 47, 63–74, 76–78, 84–85, 87, 91–94, 96–97, 111–118, 120–121, 125–132, 134–136
TOTAL2788154344% 

@vmoshynskyi vmoshynskyi merged commit 3efd368 into main Nov 26, 2025
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@vmoshynskyi vmoshynskyi deleted the IEBH-353 branch November 26, 2025 12:51
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